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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817892.1_cds_XP_016499360.1_13292
CDS Infomation

[gene=LOC107817976] [db_xref=GeneID:107817976] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016499360.1] [location=complement(2347..3654)] [gbkey=CDS]
Sequence

ATGGCAAATTGTGTAACACATTATTCATTTTTTATCATCTCTGCTATTCTAGCTTCAATA
TTTTCATTCACAAAAGCTATGAACAATGGTTTTAGCCTTGATCTCATTCATAGAGATTCA
CCAAATTCCCCCTTTTATGATCCTTCCTTAAGTTACACAAAGCATATGAGCAATTCATTT
CATCGCTCTTTCAATCGTTCTAAAGATTTTGGTTCAAGATCCTCGATCATTGTTGCTTCT
AACAATGGAGAGTATCTCATGAAATTCTCCTTAGGTACACCCCCTGTACATACCTTAGGA
GTTGCTGATACTGGTAGTGATCTTACTTGGACACAGTGTTTGCCTTGTAAAAATTGTTTC
AAGCAACAACCTCGTCTCTTCAACCCTAAAAAATCCTCGACCTATAAATCCTTACCTTGC
GATTCCAAAATGTGTCATGCACCATTTTCAACTTCTTGCAACAGAAAAAAAAGGACTTGT
GATTATCAAGTCATGTATGGAGATCAATCTTATAGTGTTGGTGATTTAGCAACTGAGACT
ATACGATTTGGTTCGTCAAAAAATACACACGTCTCCTTAAAAAACACCGTTATTGGGTGT
GGACACAATAATGCAGGTACGTTCAGTGGTGACAAAGAGTCAGGCATTGTAGGATTAGGA
GGTGGGAATTTTTCACTAATTTCCCAAATGGGATCCTCAATTGGAGGTAAATTCTCGTAT
TGTTTAGCTCCGTTGTCTCAACACAATCATGTTTCCAAAAGCAGAATACATTTTGGTACT
AATGCTATTGTTTTGGGTAATAAAGTTGTGACAACACCTTTAGCTAAAAAATCTCCAGCA
ACCTTCTATTTTCTCACACTAGAAGGTGTAAGTGTGGGTAAAAAAAGATTGGATTTTCGA
AAAGTGTCCTTTTCTTTTGGAGAGGGAAATATTATTTTGGACTCAGGGACTGTGTTAACA
TTGTTTTCGCCCGAAATATACGTTAAATTAGAAGCAATGATGAAGGAGAAAATTAAACTG
CCAACAGTAACAGATCCAACAAGAACACTGAGTTTGTGCTACAAATCTTTGTCAGTTGAA
AAAATTCCAATCATAACTATGCATTTTAAAGGTGCAGATGTGAAGTTGGGTCCATTAAAT
ACATTTGTTGAGACAAGTGAAAGCTCTATGTGCTTTGCTTTTGCTGCATCATATGGTGTT
TCAATTTATGGGAATATTGCACAAATGAATTTCTTGGTTGGTTATGACTTAAAGAGGAGA
AGTATATCTTTCAAAGCTGCTGATTGCACTAAACCGTTGCATAATTGA

Peptide Sequence

PEP ID

XP_016499360.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MANCVTHYSFFIISAILASIFSFTKAMNNGFSLDLIHRDSPNSPFYDPSLSYTKHMSNSF
HRSFNRSKDFGSRSSIIVASNNGEYLMKFSLGTPPVHTLGVADTGSDLTWTQCLPCKNCF
KQQPRLFNPKKSSTYKSLPCDSKMCHAPFSTSCNRKKRTCDYQVMYGDQSYSVGDLATET
IRFGSSKNTHVSLKNTVIGCGHNNAGTFSGDKESGIVGLGGGNFSLISQMGSSIGGKFSY
CLAPLSQHNHVSKSRIHFGTNAIVLGNKVVTTPLAKKSPATFYFLTLEGVSVGKKRLDFR
KVSFSFGEGNIILDSGTVLTLFSPEIYVKLEAMMKEKIKLPTVTDPTRTLSLCYKSLSVE
KIPIITMHFKGADVKLGPLNTFVETSESSMCFAFAASYGVSIYGNIAQMNFLVGYDLKRR
SISFKAADCTKPLHN

Transcript Sequence

Gene sequence data has not been registered.